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Bioinfosummer 2013

Ben session (Friday)

Starting the notebook server.

$ ipython notebook --script --pylab=inline

Download file "solution.zip"

Download file "workshop.zip"

Gavin session (Tuesday)

Concat code

Download file "start_code.zip"

Data

Download file "mtDNA.zip"

Download file "nuclear.zip"

Solutions (with bug fixes)

Download file "gavin_workshop_solutions.tar.gz"

Overview

Download file "huttley_prac.pdf"

Comments

/groups/tic/search/index.rss?tag=hotlist/groups/tic/search/?tag=hotWhat’s HotHotListHot!?tag=hot8/groups/tic/sidebar/HotListemmadowlingEmma Dowling2015-12-03 23:06:19+00:002015-12-03 23:06:19updated28emmadowlingEmma Dowling2015-10-01 05:31:53+00:002015-10-01 05:31:53updated27gavinGavin Huttley2015-09-22 02:28:27+00:002015-09-22 02:28:27updated26gavinGavin Huttley2015-09-14 04:46:30+00:002015-09-14 04:46:30updated25emmadowlingEmma Dowling2015-09-14 00:26:50+00:002015-09-14 00:26:50updated24emmadowlingEmma Dowling2015-09-11 04:30:17+00:002015-09-11 04:30:17updated23emmadowlingEmma Dowling2015-08-27 05:19:06+00:002015-08-27 05:19:06updated22emmadowlingEmma Dowling2015-08-26 00:36:22+00:002015-08-26 00:36:22updated21emmadowlingEmma Dowling2015-08-21 03:34:53+00:002015-08-21 03:34:53updated20emmadowlingEmma Dowling2015-08-11 04:40:56+00:002015-08-11 04:40:56updated19emmadowlingEmma Dowling2015-08-05 00:42:06+00:002015-08-05 00:42:06updated18emmadowlingEmma Dowling2015-07-31 01:58:17+00:002015-07-31 01:58:17updated17emmadowlingEmma Dowling2015-07-24 05:00:22+00:002015-07-24 05:00:22updated16Emma DowlingEmma Dowling2015-06-18 03:30:17+00:002015-06-18 03:30:17updated15jackieJackie Stenhouse2015-06-14 23:55:03+00:002015-06-14 23:55:03updated14jackieJackie Stenhouse2015-06-01 04:42:44+00:002015-06-01 04:42:44updated13jackieJackie Stenhouse2015-05-28 01:46:47+00:002015-05-28 01:46:47updated12emmadowlingEmma Dowling2015-05-11 01:08:53+00:002015-05-11 01:08:53updated11gavinGavin Huttley2015-04-07 22:53:44+00:002015-04-07 22:53:44updated10emmadowlingEmma Dowling2015-04-02 03:04:03+00:002015-04-02 03:04:03updated9gavinGavin Huttley2015-04-01 01:15:42+00:002015-04-01 01:15:42updated8gavinGavin Huttley2015-04-01 01:04:36+00:002015-04-01 01:04:36updated7gavinGavin Huttley2015-04-01 00:55:58+00:002015-04-01 00:55:58updated6Added tag - hotjackieJackie Stenhouse2015-03-24 23:49:31+00:002015-03-24 23:49:31addTag5jackieJackie Stenhouse2015-02-25 03:49:00+00:002015-02-25 03:49:00updated4jackieJackie Stenhouse2015-02-18 05:41:50+00:002015-02-18 05:41:50updated3jackieJackie Stenhouse2015-01-23 02:00:00+00:002015-01-23 02:00:00updated2First createdjackieJackie Stenhouse2015-01-23 01:47:50+00:002015-01-23 01:47:50created1wiki2015-12-03T23:06:19+00:00groups/tic/wiki/89d11False2015 Calendar/groups/tic/wiki/89d11/2015_Calendar.htmlEmma Dowling28 updates2015 Calendar To edit this page, click the Edit (pencil) button. To delete this page, click the Delete (–) button. Date Venue ...Falseemmadowling2015-12-03T23:06:19+00:00gavinGavin Huttley2013-12-06 03:00:17+00:002013-12-06 03:00:17updated14gavinGavin Huttley2013-12-05 23:44:39+00:002013-12-05 23:44:39updated13gavinGavin Huttley2013-12-05 23:42:04+00:002013-12-05 23:42:04updated12gavinGavin Huttley2013-12-04 01:36:51+00:002013-12-04 01:36:51updated11gavinGavin Huttley2013-12-04 00:59:47+00:002013-12-04 00:59:47updated10gavinGavin Huttley2013-12-03 05:03:20+00:002013-12-03 05:03:20updated9gavinGavin Huttley2013-12-03 03:54:08+00:002013-12-03 03:54:08updated8Added tag - hotgavinGavin Huttley2013-12-03 03:53:44+00:002013-12-03 03:53:44addTag7gavinGavin Huttley2013-12-03 03:53:26+00:002013-12-03 03:53:26updated6gavinGavin Huttley2013-12-02 12:08:07+00:002013-12-02 12:08:07updated5gavinGavin Huttley2013-12-02 11:50:46+00:002013-12-02 11:50:46updated4gavinGavin Huttley2013-11-26 09:51:40+00:002013-11-26 09:51:40updated3gavinGavin Huttley2013-11-26 09:09:53+00:002013-11-26 09:09:53updated2First createdgavinGavin Huttley2013-11-26 09:09:22+00:002013-11-26 09:09:22created1wiki2013-12-06T03:00:17+00:00groups/tic/wiki/62bb3FalseBioinfosummer 2013/groups/tic/wiki/62bb3/Bioinfosummer_2013.htmlGavin Huttley14 updatesBioinfosummer 2013 Ben session (Friday) Starting the notebook server. $ ipython notebook --script --pylab=inline [Download file "solution.zip"] [Dow...Falsegavin2013-12-06T03:00:17+00:00gavinGavin Huttley2013-09-10 23:14:05+00:002013-09-10 23:14:05updated17gavinGavin Huttley2013-09-10 23:13:41+00:002013-09-10 23:13:41updated16gavinGavin Huttley2013-09-10 23:11:37+00:002013-09-10 23:11:37updated15gavinGavin Huttley2013-09-10 03:27:50+00:002013-09-10 03:27:50updated14gavinGavin Huttley2013-09-03 03:23:37+00:002013-09-03 03:23:37updated13gavinGavin Huttley2013-08-30 23:29:42+00:002013-08-30 23:29:42updated12gavinGavin Huttley2013-08-30 23:28:00+00:002013-08-30 23:28:00updated11gavinGavin Huttley2013-08-30 23:04:10+00:002013-08-30 23:04:10updated10gavinGavin Huttley2013-08-27 05:04:20+00:002013-08-27 05:04:20updated9gavinGavin Huttley2013-08-27 04:40:36+00:002013-08-27 04:40:36updated8gavinGavin Huttley2013-08-27 04:30:55+00:002013-08-27 04:30:55updated7gavinGavin Huttley2013-08-27 04:30:20+00:002013-08-27 04:30:20updated6gavinGavin Huttley2013-08-27 04:27:56+00:002013-08-27 04:27:56updated5Added tag - screencastgavinGavin Huttley2013-08-27 04:26:30+00:002013-08-27 04:26:30addTag4Added tag - pythongavinGavin Huttley2013-08-27 04:26:27+00:002013-08-27 04:26:27addTag3Added tag - hotgavinGavin Huttley2013-08-27 04:26:17+00:002013-08-27 04:26:17addTag2First createdgavinGavin Huttley2013-08-27 04:25:46+00:002013-08-27 04:25:46created1wiki2013-09-10T23:14:05+00:00groups/tic/wiki/bcdc6FalseGDU Python Course 2013/groups/tic/wiki/bcdc6/GDU_Python_Course_2013.htmlGavin Huttley17 updatesGDU Python Course 2013 Below are the screencasts from the Python Course, organised and run by the Genome Discovery Unit. Each day is organised into 3 ~50 minute blocks....Falsegavin2013-09-10T23:14:05+00:00gavinGavin Huttley2013-08-30 23:23:27+00:002013-08-30 23:23:27updated31Added tag - screencastgavinGavin Huttley2013-08-30 23:23:24+00:002013-08-30 23:23:24addTag30Added tag - pythongavinGavin Huttley2013-08-30 23:23:22+00:002013-08-30 23:23:22addTag29gavinGavin Huttley2013-08-30 23:22:28+00:002013-08-30 23:22:28updated28gavinGavin Huttley2013-08-30 23:15:35+00:002013-08-30 23:15:35updated27gavinGavin Huttley2013-08-30 23:10:51+00:002013-08-30 23:10:51updated26gavinGavin Huttley2013-08-23 09:28:09+00:002013-08-23 09:28:09updated25gavinGavin Huttley2013-08-23 09:27:54+00:002013-08-23 09:27:54updated24gavinGavin Huttley2013-08-23 08:52:08+00:002013-08-23 08:52:08updated23gavinGavin Huttley2013-08-23 08:50:14+00:002013-08-23 08:50:14updated22gavinGavin Huttley2013-08-23 08:47:59+00:002013-08-23 08:47:59updated21gavinGavin Huttley2013-08-23 08:46:06+00:002013-08-23 08:46:06updated20gavinGavin Huttley2013-08-23 08:42:59+00:002013-08-23 08:42:59updated19gavinGavin Huttley2013-08-23 08:41:06+00:002013-08-23 08:41:06updated18gavinGavin Huttley2013-08-20 02:03:10+00:002013-08-20 02:03:10updated17gavinGavin Huttley2013-08-20 02:02:36+00:002013-08-20 02:02:36updated16gavinGavin Huttley2013-08-16 06:22:43+00:002013-08-16 06:22:43updated15gavinGavin Huttley2013-08-14 01:36:10+00:002013-08-14 01:36:10updated14gavinGavin Huttley2013-08-13 02:31:03+00:002013-08-13 02:31:03updated13gavinGavin Huttley2013-08-11 08:14:06+00:002013-08-11 08:14:06updated12gavinGavin Huttley2013-08-11 01:07:31+00:002013-08-11 01:07:31updated11gavinGavin Huttley2013-08-10 23:46:12+00:002013-08-10 23:46:12updated10gavinGavin Huttley2013-08-09 01:43:35+00:002013-08-09 01:43:35updated9gavinGavin Huttley2013-08-09 01:40:14+00:002013-08-09 01:40:14updated8gavinGavin Huttley2013-08-09 01:35:31+00:002013-08-09 01:35:31updated7gavinGavin Huttley2013-08-07 02:42:17+00:002013-08-07 02:42:17updated6gavinGavin Huttley2013-08-07 02:40:17+00:002013-08-07 02:40:17updated5gavinGavin Huttley2013-08-07 02:34:52+00:002013-08-07 02:34:52updated4Added tag - hotgavinGavin Huttley2013-08-07 02:27:46+00:002013-08-07 02:27:46addTag3gavinGavin Huttley2013-08-07 02:27:37+00:002013-08-07 02:27:37updated2First createdgavinGavin Huttley2013-08-07 02:25:54+00:002013-08-07 02:25:54created1wiki2013-08-30T23:23:27+00:00groups/tic/wiki/1dc17FalseIntroduction to programming 2013/groups/tic/wiki/1dc17/Introduction_to_programming_2013.htmlGavin Huttley31 updatesIntroduction to programming 2013 These screencasts are lectures by Gavin Huttley in ANU BIOL3157. They are a very elementary introduction to programming using Python. The lecture...Falsegavin2013-08-30T23:23:27+00:00Added tag - hotjackieJackie Stenhouse2013-03-04 02:05:59+00:002013-03-04 02:05:59addTag3jackieJackie Stenhouse2013-03-04 02:03:28+00:002013-03-04 02:03:28updated2First createdjackieJackie Stenhouse2013-03-04 02:02:50+00:002013-03-04 02:02:50created1wiki2013-03-04T02:03:28+00:00groups/tic/wiki/27ea8FalseEncode Revisited (TIC Talk 15 March 2013): Read this journal article first./groups/tic/wiki/27ea8/Encode_Revisited_TIC_Talk_15_March_2013__Read_this_journal_article_first.htmlJackie Stenhouse3 updatesEncode Revisited (TIC Talk 15 March 2013): Read this journal article first.[Download file "Genome Biol Evol-2013-Graur-gbe_evt028.pdf"] Falsejackie2013-03-04T02:03:28+00:00hot/groups/tic/search/index.rss?sort=modifiedDate&kind=all&sortDirection=reverse&excludePages=wiki/welcomelist/groups/tic/search/?sort=modifiedDate&kind=all&sortDirection=reverse&excludePages=wiki/welcomeRecent ChangesRecentChangesListUpdates?sort=modifiedDate&kind=all&sortDirection=reverse&excludePages=wiki/welcome0/groups/tic/sidebar/RecentChangesListmodifiedDateallRecent ChangesRecentChangesListUpdateswiki/welcomeNo recent changes.reverse5searchlist/groups/tic/calendar/Upcoming EventsUpcomingEventsListEvents1Getting events…